DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Xanthoceras sorbifolium 99658 2 28 Xanthoceras Sapindaceae Sapindales Magnoliopsida Streptophyta
Cucurbita maxima 3661 2 3 Cucurbita Cucurbitaceae Cucurbitales Magnoliopsida Streptophyta
Streptochaeta angustifolia 38733 2 10 Streptochaeta Poaceae Poales Magnoliopsida Streptophyta
Lasiodiplodia theobromae 45133 2 15 Lasiodiplodia Botryosphaeriaceae Botryosphaeriales Dothideomycetes Ascomycota
Andrographis paniculata 175694 2 11 Andrographis Acanthaceae Lamiales Magnoliopsida Streptophyta
Chiloscyllium plagiosum 36176 2 6 Chiloscyllium Hemiscylliidae Orectolobiformes Chondrichthyes Chordata
Gymnocypris przewalskii 75348 2 16 Gymnocypris Cyprinidae Cypriniformes Actinopteri Chordata
Vibrio cholerae 948564 2 3 Vibrio Vibrionaceae Vibrionales Gammaproteobacteria Pseudomonadota
Agropyron mongolicum 37717 2 28 Agropyron Poaceae Poales Magnoliopsida Streptophyta
Heterodera glycines 51029 2 4 Heterodera Heteroderidae Rhabditida Chromadorea Nematoda
Sesamum indicum 4182 2 30 Sesamum Pedaliaceae Lamiales Magnoliopsida Streptophyta
Toona sinensis 443222 2 8 Toona Meliaceae Sapindales Magnoliopsida Streptophyta
Pospiviroid fusituberis 12892 2 2 Pospiviroid Pospiviroidae None None None
Vigna radiata 157791 2 7 Vigna Fabaceae Fabales Magnoliopsida Streptophyta
Rubus argutus 59490 2 33 Rubus Rosaceae Rosales Magnoliopsida Streptophyta
Notamacropus eugenii 9315 2 12 Notamacropus Macropodidae Diprotodontia Mammalia Chordata
Candida albicans 5476 2 4 Candida Debaryomycetaceae Serinales Pichiomycetes Ascomycota
Salvelinus alpinus 8036 2 80 Salvelinus Salmonidae Salmoniformes Actinopteri Chordata
Haliotis discus 42344 2 14 Haliotis Haliotidae Lepetellida Gastropoda Mollusca
human gut metagenome 408170 2 6 None None None None None
Persea americana 3435 2 4 Persea Lauraceae Laurales Magnoliopsida Streptophyta
Colocasia esculenta 4460 2 20 Colocasia Araceae Alismatales Magnoliopsida Streptophyta
Mus musculus 10092 2 21 Mus Muridae Rodentia Mammalia Chordata
Pimephales promelas 90988 2 44 Pimephales Leuciscidae Cypriniformes Actinopteri Chordata
Giardia intestinalis 5741 2 12 Giardia Hexamitidae Diplomonadida None Fornicata