DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Cryptococcus deneoformans 40410 2 11 Cryptococcus Cryptococcaceae Tremellales Tremellomycetes Basidiomycota
Triticum urartu 4572 2 8 Triticum Poaceae Poales Magnoliopsida Streptophyta
Dahlia pinnata 101596 2 2 Dahlia Asteraceae Asterales Magnoliopsida Streptophyta
Agaricus bisporus 5341 2 4 Agaricus Agaricaceae Agaricales Agaricomycetes Basidiomycota
Solanum lycopersicum x Solanum pennellii 872925 2 29 Solanum Solanaceae Solanales Magnoliopsida Streptophyta
Elettaria cardamomum 105181 2 4 Elettaria Zingiberaceae Zingiberales Magnoliopsida Streptophyta
Parasteatoda tepidariorum 114398 2 17 Parasteatoda Theridiidae Araneae Arachnida Arthropoda
Rapana venosa 55521 2 21 Rapana Muricidae Neogastropoda Gastropoda Mollusca
Gossypium herbaceum 34274 2 17 Gossypium Malvaceae Malvales Magnoliopsida Streptophyta
Caenorhabditis brenneri 135651 2 5 Caenorhabditis Rhabditidae Rhabditida Chromadorea Nematoda
Pyropia yezoensis 2788 2 2 Pyropia Bangiaceae Bangiales Bangiophyceae Rhodophyta
Selaginella moellendorffii 88036 2 3 Selaginella Selaginellaceae Selaginellales Lycopodiopsida Streptophyta
Rhopalosiphum padi 40932 2 3 Rhopalosiphum Aphididae Hemiptera Insecta Arthropoda
Camponotus floridanus 104421 2 29 Camponotus Formicidae Hymenoptera Insecta Arthropoda
Mytilus galloprovincialis 29158 2 13 Mytilus Mytilidae Mytilida Bivalvia Mollusca
None 4071 2 14 Capsicum Solanaceae Solanales Magnoliopsida Streptophyta
chicken gut metagenome 506600 2 13 None None None None None
Portunus trituberculatus 210409 2 6 Portunus Portunidae Decapoda Malacostraca Arthropoda
Folsomia candida 158441 2 2 Folsomia Isotomidae Entomobryomorpha Collembola Arthropoda
Plasmodium falciparum 36329 2 4 Plasmodium Plasmodiidae Haemosporida Aconoidasida Apicomplexa
Spinacia oleracea 3562 2 16 Spinacia Chenopodiaceae Caryophyllales Magnoliopsida Streptophyta
Saccharum hybrid cultivar 676074 2 8 Saccharum Poaceae Poales Magnoliopsida Streptophyta
Sus scrofa 415978 2 8 Sus Suidae Artiodactyla Mammalia Chordata
Phalaenopsis equestris 78828 2 11 Phalaenopsis Orchidaceae Asparagales Magnoliopsida Streptophyta
None 2068716 2 16 None Anatidae Anseriformes Aves Chordata