DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Pseudomonas fluorescens 294 1 3 Pseudomonas Pseudomonadaceae Pseudomonadales Gammaproteobacteria Pseudomonadota
Medicago sativa 3878 1 3 Medicago Fabaceae Fabales Magnoliopsida Streptophyta
Betula platyphylla 78630 1 4 Betula Betulaceae Fagales Magnoliopsida Streptophyta
symbiont metagenome 410662 1 7 None None None None None
Gorteria diffusa 259878 1 8 Gorteria Asteraceae Asterales Magnoliopsida Streptophyta
Cuscuta indecora 267559 1 3 Cuscuta Convolvulaceae Solanales Magnoliopsida Streptophyta
seed metagenome 1335591 1 1 None None None None None
Heterostelium album 2086695 1 1 Heterostelium Acytosteliaceae Acytosteliales Eumycetozoa Evosea
Erwinia amylovora 552 1 3 Erwinia Erwiniaceae Enterobacterales Gammaproteobacteria Pseudomonadota
Prototheca zopfii 3112 1 2 Prototheca Chlorellaceae Chlorellales Trebouxiophyceae Chlorophyta
Crotalus basiliscus 8744 1 2 Crotalus Viperidae Squamata Lepidosauria Chordata
Phelipanche aegyptiaca 99112 1 2 Phelipanche Orobanchaceae Lamiales Magnoliopsida Streptophyta
Pieris napi 78633 1 73 Pieris Pieridae Lepidoptera Insecta Arthropoda
Acipenser baerii 27689 1 11 Acipenser Acipenseridae Acipenseriformes Actinopteri Chordata
Orthotospovirus tomatomaculae 3052585 1 4 Orthotospovirus Tospoviridae Bunyavirales Ellioviricetes Negarnaviricota
Capsicum chacoense 107817 1 3 Capsicum Solanaceae Solanales Magnoliopsida Streptophyta
None 4650 1 3 Zingiber Zingiberaceae Zingiberales Magnoliopsida Streptophyta
Amphimedon queenslandica 400682 1 9 Amphimedon Niphatidae Haplosclerida Demospongiae Porifera
Alsophila spinulosa 204586 1 1 Alsophila Cyatheaceae Cyatheales Polypodiopsida Streptophyta
Zea mays subsp. mays x Zea mays subsp. mexicana 3053866 1 20 Zea Poaceae Poales Magnoliopsida Streptophyta
Arabidopsis kamchatica 59690 1 4 Arabidopsis Brassicaceae Brassicales Magnoliopsida Streptophyta
Actinidia deliciosa 3627 1 18 Actinidia Actinidiaceae Ericales Magnoliopsida Streptophyta
Tetraodon nigroviridis 99883 1 3 Tetraodon Tetraodontidae Tetraodontiformes Actinopteri Chordata
Xenopus laevis 443947 1 12 Xenopus Pipidae Anura Amphibia Chordata
Monochasma savatieri 1501483 1 4 Monochasma Orobanchaceae Lamiales Magnoliopsida Streptophyta