DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Cucurbita pepo 3663 1 6 Cucurbita Cucurbitaceae Cucurbitales Magnoliopsida Streptophyta
Panulirus interruptus 6735 1 12 Panulirus Palinuridae Decapoda Malacostraca Arthropoda
Ceratotherium simum 9807 1 9 Ceratotherium Rhinocerotidae Perissodactyla Mammalia Chordata
Dendrobium williamsonii 161871 1 3 Dendrobium Orchidaceae Asparagales Magnoliopsida Streptophyta
None 1542223 1 2 Colon Leiodidae Coleoptera Insecta Arthropoda
Oxycarenus laetus 992336 1 2 Oxycarenus Oxycarenidae Hemiptera Insecta Arthropoda
Begomovirus coheni 10832 1 1 Begomovirus Geminiviridae Geplafuvirales Repensiviricetes Cressdnaviricota
Pipistrellus kuhlii 59472 1 3 Pipistrellus Vespertilionidae Chiroptera Mammalia Chordata
Drosophila azteca 7249 1 2 Drosophila Drosophilidae Diptera Insecta Arthropoda
Pyropia haitanensis 1262161 1 15 Pyropia Bangiaceae Bangiales Bangiophyceae Rhodophyta
Caenorhabditis plicata 281681 1 1 Caenorhabditis Rhabditidae Rhabditida Chromadorea Nematoda
None 2843217 1 12 None None None None None
Rhizophagus irregularis 747089 1 9 Rhizophagus Glomeraceae Glomerales Glomeromycetes Mucoromycota
Trichoderma asperellum 101201 1 1 Trichoderma Hypocreaceae Hypocreales Sordariomycetes Ascomycota
Dioscorea esculenta 323665 1 12 Dioscorea Dioscoreaceae Dioscoreales Magnoliopsida Streptophyta
Blaps rhynchoptera 1379410 1 1 Blaps Tenebrionidae Coleoptera Insecta Arthropoda
Zymoseptoria tritici 336722 1 14 Zymoseptoria Mycosphaerellaceae Mycosphaerellales Dothideomycetes Ascomycota
Juglans mandshurica 91218 1 12 Juglans Juglandaceae Fagales Magnoliopsida Streptophyta
Vaccinium darrowii 229202 1 4 Vaccinium Ericaceae Ericales Magnoliopsida Streptophyta
Gynandropsis gynandra 190802 1 1 Gynandropsis Cleomaceae Brassicales Magnoliopsida Streptophyta
Squalius alburnoides 70739 1 3 Squalius Leuciscidae Cypriniformes Actinopteri Chordata
Karenia mikimotoi 225107 1 4 Karenia Kareniaceae Gymnodiniales Dinophyceae None
sediment metagenome 749907 1 13 None None None None None
Babesia divergens 32595 1 2 Babesia Babesiidae Piroplasmida Aconoidasida Apicomplexa
Euproctis pseudoconspersa 1510228 1 1 Euproctis Erebidae Lepidoptera Insecta Arthropoda