DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
| Species | TaxonID | Studies | Samples | Genus | Family | Order | Class | Phylum |
|---|---|---|---|---|---|---|---|---|
| Oryza sativa | 1736659 | 1 | 6 | Oryza | Poaceae | Poales | Magnoliopsida | Streptophyta |
| Piaractus mesopotamicus x Colossoma macropomum | 2720723 | 1 | 5 | None | Serrasalmidae | Characiformes | Actinopteri | Chordata |
| Phycodurus eques | 693459 | 1 | 5 | Phycodurus | Syngnathidae | Syngnathiformes | Actinopteri | Chordata |
| Motacilla alba | 303315 | 1 | 10 | Motacilla | Motacillidae | Passeriformes | Aves | Chordata |
| Lithobates pipiens | 8404 | 1 | 11 | Lithobates | Ranidae | Anura | Amphibia | Chordata |
| Lasioglossum leucozonium | 88532 | 1 | 1 | Lasioglossum | Halictidae | Hymenoptera | Insecta | Arthropoda |
| Pyrococcus furiosus | 2261 | 1 | 1 | Pyrococcus | Thermococcaceae | Thermococcales | Thermococci | Methanobacteriota |
| Erigeron canadensis | 72917 | 1 | 1 | Erigeron | Asteraceae | Asterales | Magnoliopsida | Streptophyta |
| Alosa sapidissima | 34773 | 1 | 9 | Alosa | Clupeidae | Clupeiformes | Actinopteri | Chordata |
| Peromyscus californicus | 564181 | 1 | 10 | Peromyscus | Cricetidae | Rodentia | Mammalia | Chordata |
| Diabrotica virgifera | 50389 | 1 | 4 | Diabrotica | Chrysomelidae | Coleoptera | Insecta | Arthropoda |
| Betula luminifera | 312789 | 1 | 1 | Betula | Betulaceae | Fagales | Magnoliopsida | Streptophyta |
| Acinetobacter baumannii | 470 | 1 | 12 | Acinetobacter | Moraxellaceae | Moraxellales | Gammaproteobacteria | Pseudomonadota |
| Theba pisana | 145622 | 1 | 6 | Theba | Helicidae | Stylommatophora | Gastropoda | Mollusca |
| Sebastes schlegelii | 214486 | 1 | 1 | Sebastes | Sebastidae | Perciformes | Actinopteri | Chordata |
| Klebsormidium crenulatum | 424406 | 1 | 1 | Klebsormidium | Klebsormidiaceae | Klebsormidiales | Klebsormidiophyceae | Streptophyta |
| Potexvirus bambusae | 35286 | 1 | 36 | Potexvirus | Alphaflexiviridae | Tymovirales | Alsuviricetes | Kitrinoviricota |
| Myrmica rubra | 106198 | 1 | 3 | Myrmica | Formicidae | Hymenoptera | Insecta | Arthropoda |
| Phoebe neurantha | 590039 | 1 | 6 | Phoebe | Lauraceae | Laurales | Magnoliopsida | Streptophyta |
| Escherichia coli | 679895 | 1 | 1 | Escherichia | Enterobacteriaceae | Enterobacterales | Gammaproteobacteria | Pseudomonadota |
| Zostera marina | 29655 | 1 | 7 | Zostera | Zosteraceae | Alismatales | Magnoliopsida | Streptophyta |
| Nigella sativa | 555479 | 1 | 1 | Nigella | Ranunculaceae | Ranunculales | Magnoliopsida | Streptophyta |
| Cyperus iria | 388567 | 1 | 4 | Cyperus | Cyperaceae | Poales | Magnoliopsida | Streptophyta |
| Mesembryanthemum crystallinum | 3544 | 1 | 2 | Mesembryanthemum | Aizoaceae | Caryophyllales | Magnoliopsida | Streptophyta |
| Triticum monococcum | 4568 | 1 | 4 | Triticum | Poaceae | Poales | Magnoliopsida | Streptophyta |