DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Solidago canadensis 59297 4 25 Solidago Asteraceae Asterales Magnoliopsida Streptophyta
Brassica oleracea 36774 4 6 Brassica Brassicaceae Brassicales Magnoliopsida Streptophyta
Escherichia coli 511145 4 23 Escherichia Enterobacteriaceae Enterobacterales Gammaproteobacteria Pseudomonadota
Solanum habrochaites 62890 4 14 Solanum Solanaceae Solanales Magnoliopsida Streptophyta
None 3766 4 36 Pyrus Rosaceae Rosales Magnoliopsida Streptophyta
Pyrus pyrifolia 3767 4 10 Pyrus Rosaceae Rosales Magnoliopsida Streptophyta
Hydra vulgaris 6087 4 22 Hydra Hydridae Anthoathecata Hydrozoa Cnidaria
Plasmodium falciparum 5833 4 37 Plasmodium Plasmodiidae Haemosporida Aconoidasida Apicomplexa
insect metagenome 1234904 4 28 None None None None None
Catharanthus roseus 4058 4 25 Catharanthus Apocynaceae Gentianales Magnoliopsida Streptophyta
Chenopodium quinoa 63459 4 63 Chenopodium Chenopodiaceae Caryophyllales Magnoliopsida Streptophyta
Dunaliella salina 3046 4 10 Dunaliella Dunaliellaceae Chlamydomonadales Chlorophyceae Chlorophyta
Mycobacterium tuberculosis 1773 4 13 Mycobacterium Mycobacteriaceae Mycobacteriales Actinomycetes Actinomycetota
Prunus avium 42229 4 14 Prunus Rosaceae Rosales Magnoliopsida Streptophyta
Macrobrachium nipponense 159736 4 8 Macrobrachium Palaemonidae Decapoda Malacostraca Arthropoda
Ruditapes philippinarum 129788 4 27 Ruditapes Veneridae Venerida Bivalvia Mollusca
Caenorhabditis remanei 31234 3 13 Caenorhabditis Rhabditidae Rhabditida Chromadorea Nematoda
Ananas comosus 4615 3 117 Ananas Bromeliaceae Poales Magnoliopsida Streptophyta
mouse metagenome 1441287 3 22 None None None None None
Culex quinquefasciatus 7176 3 28 Culex Culicidae Diptera Insecta Arthropoda
Atractylodes lancea 41486 3 10 Atractylodes Asteraceae Asterales Magnoliopsida Streptophyta
Dimocarpus longan 128017 3 15 Dimocarpus Sapindaceae Sapindales Magnoliopsida Streptophyta
Oryza coarctata 77588 3 7 Oryza Poaceae Poales Magnoliopsida Streptophyta
Neurospora crassa 5141 3 5 Neurospora Sordariaceae Sordariales Sordariomycetes Ascomycota
Dendrobium officinale 142615 3 8 Dendrobium Orchidaceae Asparagales Magnoliopsida Streptophyta