DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Populus alba 327892 5 37 Populus Salicaceae Malpighiales Magnoliopsida Streptophyta
Panax ginseng 4054 5 17 Panax Araliaceae Apiales Magnoliopsida Streptophyta
Hyalomma anatolicum 176093 5 5 Hyalomma Ixodidae Ixodida Arachnida Arthropoda
Plectropomus leopardus 160734 5 40 Plectropomus Serranidae Perciformes Actinopteri Chordata
Bombus terrestris 30195 5 39 Bombus Apidae Hymenoptera Insecta Arthropoda
Pinctada fucata 50426 5 46 Pinctada Pteriidae Pterioida Bivalvia Mollusca
Carassius auratus 7957 4 32 Carassius Cyprinidae Cypriniformes Actinopteri Chordata
Citrus x paradisi 37656 4 20 Citrus Rutaceae Sapindales Magnoliopsida Streptophyta
Penaeus monodon 6687 4 20 Penaeus Penaeidae Decapoda Malacostraca Arthropoda
Ixodes scapularis 6945 4 25 Ixodes Ixodidae Ixodida Arachnida Arthropoda
Gossypium arboreum 29729 4 14 Gossypium Malvaceae Malvales Magnoliopsida Streptophyta
mouse gut metagenome 410661 4 30 None None None None None
Schistosoma mansoni 6183 4 39 Schistosoma Schistosomatidae Strigeidida Trematoda Platyhelminthes
Chlorocebus sabaeus 60711 4 20 Chlorocebus Cercopithecidae Primates Mammalia Chordata
Juglans regia 51240 4 18 Juglans Juglandaceae Fagales Magnoliopsida Streptophyta
Laodelphax striatellus 195883 4 11 Laodelphax Delphacidae Hemiptera Insecta Arthropoda
Fasciola hepatica 6192 4 15 Fasciola Fasciolidae Plagiorchiida Trematoda Platyhelminthes
Takifugu rubripes 31033 4 21 Takifugu Tetraodontidae Tetraodontiformes Actinopteri Chordata
Branchiostoma belcheri 7741 4 29 Branchiostoma Branchiostomatidae Amphioxiformes Leptocardii Chordata
Drosophila mojavensis 7230 4 17 Drosophila Drosophilidae Diptera Insecta Arthropoda
Chlorocebus aethiops 9534 4 35 Chlorocebus Cercopithecidae Primates Mammalia Chordata
Carica papaya 3649 4 10 Carica Caricaceae Brassicales Magnoliopsida Streptophyta
mixed sample 1427524 4 25 None None None None None
Drosophila sechellia 7238 4 6 Drosophila Drosophilidae Diptera Insecta Arthropoda
Cocos nucifera 13894 4 7 Cocos Arecaceae Arecales Magnoliopsida Streptophyta