DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Nematostella vectensis 45351 7 76 Nematostella Edwardsiidae Actiniaria Anthozoa Cnidaria
metagenome 256318 7 51 None None None None None
Bactrocera dorsalis 27457 7 58 Bactrocera Tephritidae Diptera Insecta Arthropoda
Citrus reticulata 85571 7 19 Citrus Rutaceae Sapindales Magnoliopsida Streptophyta
Panicum virgatum 38727 7 90 Panicum Poaceae Poales Magnoliopsida Streptophyta
Cucumis melo 3656 7 56 Cucumis Cucurbitaceae Cucurbitales Magnoliopsida Streptophyta
Drosophila yakuba 7245 7 23 Drosophila Drosophilidae Diptera Insecta Arthropoda
Paeonia lactiflora 35924 7 27 Paeonia Paeoniaceae Saxifragales Magnoliopsida Streptophyta
Locusta migratoria 7004 7 47 Locusta Acrididae Orthoptera Insecta Arthropoda
Brassica juncea 3707 7 44 Brassica Brassicaceae Brassicales Magnoliopsida Streptophyta
Brassica oleracea 3712 7 37 Brassica Brassicaceae Brassicales Magnoliopsida Streptophyta
Nilaparvata lugens 108931 7 32 Nilaparvata Delphacidae Hemiptera Insecta Arthropoda
Cervus nippon 9863 7 62 Cervus Cervidae Artiodactyla Mammalia Chordata
Brassica rapa 51351 7 29 Brassica Brassicaceae Brassicales Magnoliopsida Streptophyta
Prunus dulcis 3755 7 18 Prunus Rosaceae Rosales Magnoliopsida Streptophyta
Dicentrarchus labrax 13489 7 176 Dicentrarchus Moronidae None Actinopteri Chordata
human metagenome 646099 7 55 None None None None None
Columba livia 8932 7 41 Columba Columbidae Columbiformes Aves Chordata
Solanum pimpinellifolium 4084 7 45 Solanum Solanaceae Solanales Magnoliopsida Streptophyta
Populus tomentosa 118781 7 23 Populus Salicaceae Malpighiales Magnoliopsida Streptophyta
Staphylococcus aureus 1280 6 10 Staphylococcus Staphylococcaceae Bacillales Bacilli Bacillota
Paramecium tetraurelia 5888 6 44 Paramecium Parameciidae Peniculida Oligohymenophorea Ciliophora
Picea abies 3329 6 66 Picea Pinaceae Pinales Pinopsida Streptophyta
Glycine soja 3848 6 97 Glycine Fabaceae Fabales Magnoliopsida Streptophyta
Brachypodium distachyon 15368 6 47 Brachypodium Poaceae Poales Magnoliopsida Streptophyta