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ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Aedes albopictus 7160 15 141 Aedes Culicidae Diptera Insecta Arthropoda
Penaeus vannamei 6689 14 94 Penaeus Penaeidae Decapoda Malacostraca Arthropoda
Saccharomyces cerevisiae 4932 14 101 Saccharomyces Saccharomycetaceae Saccharomycetales Saccharomycetes Ascomycota
Citrus sinensis 2711 14 46 Citrus Rutaceae Sapindales Magnoliopsida Streptophyta
Prunus persica 3760 14 71 Prunus Rosaceae Rosales Magnoliopsida Streptophyta
Oreochromis niloticus 8128 14 111 Oreochromis Cichlidae Cichliformes Actinopteri Chordata
Sorghum bicolor 4558 14 85 Sorghum Poaceae Poales Magnoliopsida Streptophyta
Felis catus 9685 14 182 Felis Felidae Carnivora Mammalia Chordata
Magallana gigas 29159 14 108 Magallana Ostreidae Ostreida Bivalvia Mollusca
Megalobrama amblycephala 75352 13 34 Megalobrama Xenocyprididae Cypriniformes Actinopteri Chordata
Xenopus laevis 8355 13 54 Xenopus Pipidae Anura Amphibia Chordata
Chlamydomonas reinhardtii 3055 13 233 Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta
soil metagenome 410658 12 47 None None None None None
Phaseolus vulgaris 3885 12 192 Phaseolus Fabaceae Fabales Magnoliopsida Streptophyta
Mesocricetus auratus 10036 12 298 Mesocricetus Cricetidae Rodentia Mammalia Chordata
Medicago sativa 3879 11 79 Medicago Fabaceae Fabales Magnoliopsida Streptophyta
Drosophila virilis 7244 11 132 Drosophila Drosophilidae Diptera Insecta Arthropoda
Eriocheir sinensis 95602 11 32 Eriocheir Varunidae Decapoda Malacostraca Arthropoda
Musa acuminata 214697 11 28 Musa Musaceae Zingiberales Magnoliopsida Streptophyta
plant metagenome 1297885 11 46 None None None None None
Phyllostachys edulis 38705 10 126 Phyllostachys Poaceae Poales Magnoliopsida Streptophyta
Paralichthys olivaceus 8255 10 103 Paralichthys Paralichthyidae Pleuronectiformes Actinopteri Chordata
Triticum turgidum 4567 10 383 Triticum Poaceae Poales Magnoliopsida Streptophyta
Ginkgo biloba 3311 10 43 Ginkgo Ginkgoaceae Ginkgoales Ginkgoopsida Streptophyta
Anopheles gambiae 7165 10 89 Anopheles Culicidae Diptera Insecta Arthropoda