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ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Brassica napus 3708 31 560 Brassica Brassicaceae Brassicales Magnoliopsida Streptophyta
Oryza sativa 39946 30 160 Oryza Poaceae Poales Magnoliopsida Streptophyta
Solanum tuberosum 4113 30 305 Solanum Solanaceae Solanales Magnoliopsida Streptophyta
Oncorhynchus mykiss 8022 29 921 Oncorhynchus Salmonidae Salmoniformes Actinopteri Chordata
Macaca mulatta 9544 28 411 Macaca Cercopithecidae Primates Mammalia Chordata
Oryctolagus cuniculus 9986 27 164 Oryctolagus Leporidae Lagomorpha Mammalia Chordata
Schizosaccharomyces pombe 4896 27 115 Schizosaccharomyces Schizosaccharomycetaceae Schizosaccharomycetales Schizosaccharomycetes Ascomycota
Hordeum vulgare 4513 27 370 Hordeum Poaceae Poales Magnoliopsida Streptophyta
synthetic construct 32630 26 482 None None None None None
Brassica rapa 3711 25 203 Brassica Brassicaceae Brassicales Magnoliopsida Streptophyta
Nicotiana tabacum 4097 24 242 Nicotiana Solanaceae Solanales Magnoliopsida Streptophyta
Apis mellifera 7460 24 174 Apis Apidae Hymenoptera Insecta Arthropoda
Malus domestica 3750 24 206 Malus Rosaceae Rosales Magnoliopsida Streptophyta
Camellia sinensis 4442 23 169 Camellia Theaceae Ericales Magnoliopsida Streptophyta
Salmo salar 8030 21 461 Salmo Salmonidae Salmoniformes Actinopteri Chordata
Bos grunniens 30521 20 138 Bos Bovidae Artiodactyla Mammalia Chordata
Cucumis sativus 3659 18 196 Cucumis Cucurbitaceae Cucurbitales Magnoliopsida Streptophyta
Anas platyrhynchos 8839 18 107 Anas Anatidae Anseriformes Aves Chordata
Apostichopus japonicus 307972 17 81 Apostichopus Stichopodidae Aspidochirotida Holothuroidea Echinodermata
Capsicum annuum 4072 17 101 Capsicum Solanaceae Solanales Magnoliopsida Streptophyta
Cicer arietinum 3827 17 91 Cicer Fabaceae Fabales Magnoliopsida Streptophyta
Medicago truncatula 3880 16 252 Medicago Fabaceae Fabales Magnoliopsida Streptophyta
Bubalus bubalis 89462 16 95 Bubalus Bovidae Artiodactyla Mammalia Chordata
Drosophila simulans 7240 15 80 Drosophila Drosophilidae Diptera Insecta Arthropoda
Arachis hypogaea 3818 15 98 Arachis Fabaceae Fabales Magnoliopsida Streptophyta