DEV-SERVER!! miSRA: search preprocessed public small-RNA data against your reference sequences (miRNA, tRNA, etc)
ugr
miSRAdb summary table.
TaxonIDs and scientific names are searchable terms
Species TaxonID Studies Samples Genus Family Order Class Phylum
Coffea arabica 13443 3 64 Coffea Rubiaceae Gentianales Magnoliopsida Streptophyta
Rattus rattus 10117 3 27 Rattus Muridae Rodentia Mammalia Chordata
Anser cygnoides 8845 3 39 Anser Anatidae Anseriformes Aves Chordata
Meleagris gallopavo 9103 3 39 Meleagris Phasianidae Galliformes Aves Chordata
Haemonchus contortus 6289 3 19 Haemonchus Trichostrongylidae Rhabditida Chromadorea Nematoda
Eptesicus fuscus 29078 3 9 Eptesicus Vespertilionidae Chiroptera Mammalia Chordata
Moringa oleifera 3735 3 19 Moringa Moringaceae Brassicales Magnoliopsida Streptophyta
Cavia porcellus 10141 3 9 Cavia Caviidae Rodentia Mammalia Chordata
Humulus lupulus 3486 3 17 Humulus Cannabaceae Rosales Magnoliopsida Streptophyta
Pundamilia nyererei 303518 3 13 Pundamilia Cichlidae Cichliformes Actinopteri Chordata
Piper nigrum 13216 3 29 Piper Piperaceae Piperales Magnoliopsida Streptophyta
Streptococcus pneumoniae 373153 3 5 Streptococcus Streptococcaceae Lactobacillales Bacilli Bacillota
Clarias magur 1594786 3 6 Clarias Clariidae Siluriformes Actinopteri Chordata
Carassius carassius 217509 3 18 Carassius Cyprinidae Cypriniformes Actinopteri Chordata
Tupaia chinensis 246437 3 30 Tupaia Tupaiidae Scandentia Mammalia Chordata
pig gut metagenome 1510822 3 17 None None None None None
Paeonia ostii 459177 3 6 Paeonia Paeoniaceae Saxifragales Magnoliopsida Streptophyta
Gasterosteus aculeatus 69293 3 52 Gasterosteus Gasterosteidae Perciformes Actinopteri Chordata
Prunus domestica 3758 3 65 Prunus Rosaceae Rosales Magnoliopsida Streptophyta
Ailuropoda melanoleuca 9646 3 13 Ailuropoda Ursidae Carnivora Mammalia Chordata
None 4527 3 5 Oryza Poaceae Poales Magnoliopsida Streptophyta
Vitis amurensis 103351 3 12 Vitis Vitaceae Vitales Magnoliopsida Streptophyta
Paulownia tomentosa 39353 3 4 Paulownia Paulowniaceae Lamiales Magnoliopsida Streptophyta
Oryza glaberrima 4538 3 5 Oryza Poaceae Poales Magnoliopsida Streptophyta
Nippostrongylus brasiliensis 27835 3 11 Nippostrongylus Heligmosomidae Rhabditida Chromadorea Nematoda